PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022956541.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1677aa MW: 183418 Da PI: 6.3251

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022956541.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.4e-09	1008	1049	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE +l +av +G++ ++ I+r++ +++ qck ++ XP_022956541.1 1008 SNWTDEEKSILMQAVSSYGKD-FDMISRCVR-SKSRDQCKVFFS 1049 58***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1677 aa Download sequence
MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKLGG 60 WHQFSEETSH GYGPSRSFSD RVLEDESFRP SVPRGDGKYN RIGRESRGSF SQRDWRGHSK 120 ENSKEFGNPS RRPSSQDASS DQRSLDDTVT YSSPQSDFVS VSDKIHSKDR NDKVGGVYGL 180 GNGPRSDVEV SLGSTDWKPL KWSRSGSLSS RGSAYSSSTN SKNEKTDLPR RVASPLQSPS 240 TEATACLTSS LPSEDAISRK KPRLGWGDGL AKYEKEKVEV PDGSLRKEVT VLSSSSAELT 300 HSLGSNFAEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG IICSSPGSSS 360 QNHLQKLFSS IEKVEISSIT NLGSSLVELF NSDDPNTVES CFGKSTLNKL LAYKGEISKT 420 LETTESEIDF LENELKSLKS ENGGNVSHPK SCSAVHLVES VPYFKEQDGV SCIASRPAPL 480 KIVSSSDATV EKMPVCIGDK GIEDVGTKAD EIDSPGTVTS KFNEPSRVVK AVASNLVEND 540 HCSEATDSIV PDKMEGSFKK SGPFVDEHLT IGSGNECILA KSCTSESIYG DLTTQANCGS 600 SFRDLIFARN KEYASKATEV IFKELPTEMC KISTQSTKIV SCFETEKLVK EKIAMRRQFL 660 KFKESALTLR FKALQHSWKE GLLHSVKKSR SRPQKKELSL RVTHSGHQKY RSSIRSRFVQ 720 HGETQNPVIN SEIAIRYSSK LLLNPQVKLY RNTLKMPAMI LDKNEKMALR FISHNGLVED 780 PCAVEKERNM INPWTSAERE IFWEKLSLFG KDFRKVSSFL DLKTTADCIQ FYYKNHKSDS 840 FKKNKNLELG KQVKSSAVTY MLTSGKKWNP DVNATNLDIL GVASEMAAQA DGNIGNQQNC 900 NRHLGMGGDI GSKVSWSAST PSNKNNLDAL QTEKETVAAD VLAGICGSIS SEALSSCITS 960 AIDPSEDHKE RKCHKVDSAT KFPSTSDVMQ KTDNEPCSDD SSEDVDSSNW TDEEKSILMQ 1020 AVSSYGKDFD MISRCVRSKS RDQCKVFFSK ARKCLGLDLI HNSGDVGTPG SGNDSSGSGT 1080 DTDDHCVVET CGARSSDEFV SKSVNGLSTS VIINHEESVS AVTANMRNSS EFEESTAFEQ 1140 LDVTGAEAVV NLVSEISKEE DVPNLDSHSA CSLTNAAAFP SQPAHDHKIE GCSENTEACK 1200 RCNDPDILRP ESVATVDENS AAVSESRATT ELAFGGEEDG SDTNLHGQSM LQRSVQDSTG 1260 FNSNLDLESL GFDPRISHPK ILKVDSVANK SCIKDENSLV RNSGLGVVGR EEMLNQDMFP 1320 STLVLQGVGD AHQKPMNRDD CSDHQNRLSR HIESSEFPSS YPFNKQIVED INRNINHTDF 1380 PAFQGLSKIN CNGTYVVEDC YLQNCNSSKE PCHRAAELPL LPQNVELGHD HQNTSCSGNA 1440 SDSDVPRSKG DVKLFGQILS HAPSLQNSSS GSNDCGDEKE FHKLRKSYDM GENVPLRSYG 1500 FWNGSRMQTG LSALPDSAIL QAKYPAAFSG YSSTSLKTEQ QPLRALANNG DRNLNELVSA 1560 FPTKDGVVDY QSYRSRDGVN MRPFPVDLFS EMHRRNGYDP LSLSSLQQQG RVVVGMNVVG 1620 RGGILMGGSC TGVSDPVAAI KMHYAKSDQY VGQPGSTFTR EDGSWRGGGN GDLGSSR

Sequence ? help Back to Top

Protein Sequence Length: 1677 aa Download sequence

MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKLGG  60
WHQFSEETSH GYGPSRSFSD RVLEDESFRP SVPRGDGKYN RIGRESRGSF SQRDWRGHSK  120
ENSKEFGNPS RRPSSQDASS DQRSLDDTVT YSSPQSDFVS VSDKIHSKDR NDKVGGVYGL  180
GNGPRSDVEV SLGSTDWKPL KWSRSGSLSS RGSAYSSSTN SKNEKTDLPR RVASPLQSPS  240
TEATACLTSS LPSEDAISRK KPRLGWGDGL AKYEKEKVEV PDGSLRKEVT VLSSSSAELT  300
HSLGSNFAEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG IICSSPGSSS  360
QNHLQKLFSS IEKVEISSIT NLGSSLVELF NSDDPNTVES CFGKSTLNKL LAYKGEISKT  420
LETTESEIDF LENELKSLKS ENGGNVSHPK SCSAVHLVES VPYFKEQDGV SCIASRPAPL  480
KIVSSSDATV EKMPVCIGDK GIEDVGTKAD EIDSPGTVTS KFNEPSRVVK AVASNLVEND  540
HCSEATDSIV PDKMEGSFKK SGPFVDEHLT IGSGNECILA KSCTSESIYG DLTTQANCGS  600
SFRDLIFARN KEYASKATEV IFKELPTEMC KISTQSTKIV SCFETEKLVK EKIAMRRQFL  660
KFKESALTLR FKALQHSWKE GLLHSVKKSR SRPQKKELSL RVTHSGHQKY RSSIRSRFVQ  720
HGETQNPVIN SEIAIRYSSK LLLNPQVKLY RNTLKMPAMI LDKNEKMALR FISHNGLVED  780
PCAVEKERNM INPWTSAERE IFWEKLSLFG KDFRKVSSFL DLKTTADCIQ FYYKNHKSDS  840
FKKNKNLELG KQVKSSAVTY MLTSGKKWNP DVNATNLDIL GVASEMAAQA DGNIGNQQNC  900
NRHLGMGGDI GSKVSWSAST PSNKNNLDAL QTEKETVAAD VLAGICGSIS SEALSSCITS  960
AIDPSEDHKE RKCHKVDSAT KFPSTSDVMQ KTDNEPCSDD SSEDVDSSNW TDEEKSILMQ  1020
AVSSYGKDFD MISRCVRSKS RDQCKVFFSK ARKCLGLDLI HNSGDVGTPG SGNDSSGSGT  1080
DTDDHCVVET CGARSSDEFV SKSVNGLSTS VIINHEESVS AVTANMRNSS EFEESTAFEQ  1140
LDVTGAEAVV NLVSEISKEE DVPNLDSHSA CSLTNAAAFP SQPAHDHKIE GCSENTEACK  1200
RCNDPDILRP ESVATVDENS AAVSESRATT ELAFGGEEDG SDTNLHGQSM LQRSVQDSTG  1260
FNSNLDLESL GFDPRISHPK ILKVDSVANK SCIKDENSLV RNSGLGVVGR EEMLNQDMFP  1320
STLVLQGVGD AHQKPMNRDD CSDHQNRLSR HIESSEFPSS YPFNKQIVED INRNINHTDF  1380
PAFQGLSKIN CNGTYVVEDC YLQNCNSSKE PCHRAAELPL LPQNVELGHD HQNTSCSGNA  1440
SDSDVPRSKG DVKLFGQILS HAPSLQNSSS GSNDCGDEKE FHKLRKSYDM GENVPLRSYG  1500
FWNGSRMQTG LSALPDSAIL QAKYPAAFSG YSSTSLKTEQ QPLRALANNG DRNLNELVSA  1560
FPTKDGVVDY QSYRSRDGVN MRPFPVDLFS EMHRRNGYDP LSLSSLQQQG RVVVGMNVVG  1620
RGGILMGGSC TGVSDPVAAI KMHYAKSDQY VGQPGSTFTR EDGSWRGGGN GDLGSSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-112	MYB family protein