PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956909.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 190aa    MW: 21517.9 Da    PI: 8.3323
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956909.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY170.98.3e-5341603165
           YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.qllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                      f+ +e++CyvqC+ C+til+vsvP +sl++ vtv CGhC+sllsvn+  a+   l   s l+++l +e   e+    ++ k  ++  +s+ +  
  XP_022956909.1   4 PFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATlVPLHFLSSLSRNLPKEACREM----SSGKLFDSFIRSNLKF- 93 
                     57899****************************************99876652223334444344433333333....2222222222222222. PP

           YABBY  97 sseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165
                     s ++    e+  +p +pp v +PPekrqrvPsayn+fik+ei+r+ka+nP+++h+eaf +aaknWa fP+
  XP_022956909.1  94 SEYE---VEEGLIPVTPPsVHKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPP 160
                     2212...2333455555559************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MNHPFELPEK ICYVQCGICT TILLVSVPCS SLSMEVTVTC GHCSSLLSVN MLRATLVPLH  60
FLSSLSRNLP KEACREMSSG KLFDSFIRSN LKFSEYEVEE GLIPVTPPSV HKPPEKRQRV  120
PSAYNCFIKD EIRRLKAENP QMTHKEAFRT AAKNWANFPP TIQQKEDPQN TQIPEVEKNG  180
KCFPRHSVLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23420.18e-53YABBY family protein