PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022956911.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 173aa MW: 19692.6 Da PI: 9.6364

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022956911.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	122.6	5.9e-38	3	127	35	165
YABBY 35 vtvrCGhCtsllsvnlakas.qllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvpp.virPPekrqrvPs 127 vtv CGhC+sllsvn+ a+ l s l+++l +e e+ ++ k ++ +s+ + s ++ e+ +p +pp v +PPekrqrvPs XP_022956911.1 3 VTVTCGHCSSLLSVNMLRATlVPLHFLSSLSRNLPKEACREM----SSGKLFDSFIRSNLKF-SEYE---VEEGLIPVTPPsVHKPPEKRQRVPS 89 9**********99876652223334444344433333333....2222222222222222.2212...2333455555559******** PP YABBY 128 aynrfikeeiqrikasnPdishreafsaaaknWahfPk 165 ayn+fik+ei+r+ka+nP+++h+eaf +aaknWa fP+ XP_022956911.1 90 AYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPP 127 **********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MEVTVTCGHC SSLLSVNMLR ATLVPLHFLS SLSRNLPKEA CREMSSGKLF DSFIRSNLKF 60 SEYEVEEGLI PVTPPSVHKP PEKRQRVPSA YNCFIKDEIR RLKAENPQMT HKEAFRTAAK 120 NWANFPPTIQ QKEDPQNTQI PEVKTQSLRS EVMISNQLFK PITPNGKQNT NHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	5e-33	YABBY family protein