PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956935.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 342aa    MW: 37870.6 Da    PI: 6.0141
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956935.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.4e-14161207354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  XP_022956935.1 161 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 207
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MRGEDQEEEH HQQQQECSQT IENMFQQQLL LHQHLQNNDD DDNNNGDHHH GTGRGLIFPP  60
ELVSPVLQPW SSLNPFMIPP PPSLPCSSSS SYGGLFNRRP PNCVQFAYDG SSSADHLGQI  120
ISTTLGPVVH PGSMAPFGLQ AELGKMSAQE IMDAKALAAS KSHSEAERRR RERINNHLAK  180
LRSLLPNTTK TDKASLLAEV IQHVKELKRQ TSLIAETSPI PTEVDEVTVD DASEEMMISG  240
AKFVIKASLC CEDRSDLLPD LIKALKSLRL RTLKAEITTL GGRVRNVLFI TAEEEQQHGP  300
EQQHNMSSIQ EALKAVMERT GGDDSSSANI KRLRTTNNIN IL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167172ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-90bHLH family protein