PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956997.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 295aa    MW: 31259.1 Da    PI: 8.8205
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956997.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702189.21.5e-581152747153
          DUF702   7 sCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskk.qsalsstklssaeskk 98 
                      C+dCGn+akk+C+++RCRtCCk rg +C+thvkstWvpa++rrerq    +    ++ s+  ++a +kr++ l  ++ ++a++++++s+a++++
  XP_022956997.1 115 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGSSgsSSAGAKRPKVLIPSQtTAAAAAASTSNATTPR 209
                     6*********************************************98776654444444433778888888886555055667789999***** PP

          DUF702  99 eletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     ++et+s          lP +v+++avf+c rv++++ ge el+Yq++v+igGhvfkG+LydqG++
  XP_022956997.1 210 SFETTSshqdasfkksLPGQVQAPAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGAD 274
                     *9999999*******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MLGLRDVLFI APTPSSLHQH TQIISSDHHP SLPLPSSTAL GVSVGIFPLL AATPCLQPPP  60
NQMPDELSDR SRSLENLKRT QDFGFGKGDS LIGGGGNHGY DDQVKGDGGD GSLGVCRDCG  120
NRAKKECEYR RCRTCCKGRG NHCSTHVKST WVPASRRRER QMLVVMDGVA TSGSSGSSSA  180
GAKRPKVLIP SQTTAAAAAA STSNATTPRS FETTSSHQDA SFKKSLPGQV QAPAVFKCHR  240
VTAISSGEGE LTYQATVNIG GHVFKGFLYD QGADVKNALP SISHLHLESG NHLRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.11e-54SRS family protein