PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957061.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 564aa MW: 62729.4 Da PI: 4.3369

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957061.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.6e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv++yLk+kv+gk+++l + i+ +diyk+ePwdLp k k+k+++ ewyfFs d+ky +++r+nrat++gyWk+tgkd++v XP_022957061.1 9 LAPGFRFHPTDEELVSYYLKRKVSGKPFRL-DPISVIDIYKSEPWDLPgKsKLKTRDLEWYFFSALDRKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579*************************.89***********5347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++vg+kktLv++ grap+g +t+Wvmhey+l XP_022957061.1 103 H-NATTVGMKKTLVYHIGRAPRGARTNWVMHEYKL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MGRDSATSLA PGFRFHPTDE ELVSYYLKRK VSGKPFRLDP ISVIDIYKSE PWDLPGKSKL 60 KTRDLEWYFF SALDRKYGNS SRTNRATEKG YWKTTGKDRP VRHNATTVGM KKTLVYHIGR 120 APRGARTNWV MHEYKLTDEE MAKFSIVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE 180 ANEELALVPR DEQVADELLG GGGLHVEGDD FNENVDEGIL SESAPPPPFN FYYGETSNSI 240 EQPDNFIEDD QKAAVGICET SELPDGQTLF VLPDECGLRD RLVKHEYLAE SSNDADANAA 300 DEVDAGDVDG RYVLNEPFFS TSDNLSFSDE LLLESNELSN PTESDPAAFD VLEEYLTFFD 360 ADGENEDMSF DPSEILGSDS SVPDQSVVSE VARDATEHAS SCTQTADLRH DNEASSSSIP 420 KPEDPKAESD IKYPFLKHTS HMLGSIPAPF SSQFTSKDAG IHLNSAPQAS SSVRVTAGMI 480 IIRNMALNGE EVNNLYGKNS DLNFIYLYGI IEGDIDSSQL LPTTGVHSSK SGPLMSRYFM 540 YFFILFWVLI LSVSFKVGSC IRSR

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MGRDSATSLA PGFRFHPTDE ELVSYYLKRK VSGKPFRLDP ISVIDIYKSE PWDLPGKSKL  60
KTRDLEWYFF SALDRKYGNS SRTNRATEKG YWKTTGKDRP VRHNATTVGM KKTLVYHIGR  120
APRGARTNWV MHEYKLTDEE MAKFSIVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE  180
ANEELALVPR DEQVADELLG GGGLHVEGDD FNENVDEGIL SESAPPPPFN FYYGETSNSI  240
EQPDNFIEDD QKAAVGICET SELPDGQTLF VLPDECGLRD RLVKHEYLAE SSNDADANAA  300
DEVDAGDVDG RYVLNEPFFS TSDNLSFSDE LLLESNELSN PTESDPAAFD VLEEYLTFFD  360
ADGENEDMSF DPSEILGSDS SVPDQSVVSE VARDATEHAS SCTQTADLRH DNEASSSSIP  420
KPEDPKAESD IKYPFLKHTS HMLGSIPAPF SSQFTSKDAG IHLNSAPQAS SSVRVTAGMI  480
IIRNMALNGE EVNNLYGKNS DLNFIYLYGI IEGDIDSSQL LPTTGVHSSK SGPLMSRYFM  540
YFFILFWVLI LSVSFKVGSC IRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-137	NAC family protein