PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957062.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 517aa MW: 54306.4 Da PI: 7.5017

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957062.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.9	1e-39	128	266	5	111
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ XP_022957062.1 128 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNISIRSSGSTLSAPpsksaphsfh 222 89****************************************************************88875555666666444445555667777 PP TCP 89 .......................kaaksaakskksqksaasalnla 111 + +++++++++++ +lnl+ XP_022957062.1 223 galalahhpnayeegfahaallgFHHHHHHQQQQQHHHH--QLNLM 266 776666666666666665555432222222222222222..24444 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MELTDMQQSN KQQQQHHHHH SNQNQKPPPP PQQQQHHVVP FDGRSAAAGG GPPFMGSIST 60 LVSLPPPSSS ASNSSSNSSS SSSSSAVAPP PHLLDASLVI ATRSDTTTNP SPRSASASAS 120 TSNANALKRS TKDRHTKVDG RGRRIRMPAT CAARVFQLTR ELGHKSDGET IEWLLQQAEP 180 AIIAATGTGT IPANFSSLNI SIRSSGSTLS APPSKSAPHS FHGALALAHH PNAYEEGFAH 240 AALLGFHHHH HHQQQQQHHH HQLNLMTADQ IADALPGGES GGGGGGGDST DNYMRKRYRE 300 DLFKEDTQSP GESSGGAGSP KAIKSDLQLE KQQSQQQSAS SSLLRPATAM WAVAPSSGAS 360 NTFWMLPVTT GSGGANVGSS GASGGPMEAQ MWPFSTSANT LQAPLHFMPR FNIPGGVEIQ 420 AAGAAAGGGG RAGQLQLGSM LMHQQQQQQQ QQQQQQLGLG VSESNLGVLA ALNAAYSRGG 480 FNANSDHHHN HHPLEHHSNA PQPHATDSGD EDPKTSQ

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MELTDMQQSN KQQQQHHHHH SNQNQKPPPP PQQQQHHVVP FDGRSAAAGG GPPFMGSIST  60
LVSLPPPSSS ASNSSSNSSS SSSSSAVAPP PHLLDASLVI ATRSDTTTNP SPRSASASAS  120
TSNANALKRS TKDRHTKVDG RGRRIRMPAT CAARVFQLTR ELGHKSDGET IEWLLQQAEP  180
AIIAATGTGT IPANFSSLNI SIRSSGSTLS APPSKSAPHS FHGALALAHH PNAYEEGFAH  240
AALLGFHHHH HHQQQQQHHH HQLNLMTADQ IADALPGGES GGGGGGGDST DNYMRKRYRE  300
DLFKEDTQSP GESSGGAGSP KAIKSDLQLE KQQSQQQSAS SSLLRPATAM WAVAPSSGAS  360
NTFWMLPVTT GSGGANVGSS GASGGPMEAQ MWPFSTSANT LQAPLHFMPR FNIPGGVEIQ  420
AAGAAAGGGG RAGQLQLGSM LMHQQQQQQQ QQQQQQLGLG VSESNLGVLA ALNAAYSRGG  480
FNANSDHHHN HHPLEHHSNA PQPHATDSGD EDPKTSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-54	TCP family protein