PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957210.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 174aa    MW: 18960.2 Da    PI: 5.0582
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957210.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.33.9e-5727122297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPian+srimkk+lPan+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+y++plk yl++yrele +
  XP_022957210.1  27 REQDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLTRYRELECD 121
                     89*******************************************************************************************98 PP

           NF-YB  97 k 97 
                      
  XP_022957210.1 122 A 122
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MAEPPTSPPG GSHESGGEQS PITGGAREQD RFLPIANISR IMKKALPANG KIAKDAKDTV  60
QECVSEFISF VTSEASDKCQ KEKRKTINGD DLLWAMATLG FEEYIDPLKS YLTRYRELEC  120
DAKGSSRGGD ESAKRDAVGA MPGQNSQQYM QSGALTYINT QGQHLIIPSM QNNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-72NF-YB family protein