PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957219.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 426aa    MW: 48191.6 Da    PI: 9.0501
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957219.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix63.83.8e-2079173286
        trihelix   2 WtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                     Wt qe++ Li+a++ ++er ++               + +W++v ++++++g++rs++qC++kw+nl ++ykk++e e++  ++++s++p + ++
  XP_022957219.1  79 WTLQETMILITAKKLDDERRNKVTlapptdptarkGGELRWKWVENYCWSHGCHRSQNQCNDKWDNLLRDYKKVREYESRA-CDQQSQIPSYWKM 172
                     **************9999999863444444554447899****************************************85.99999******** PP

        trihelix  86 e 86 
                     e
  XP_022957219.1 173 E 173
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MPKPCRILRQ HHRSHRISSS STTPPPPPPP XXXHHHHQQQ QLLHLPLIHG GAARINTAAA  60
AAATSSSTVI VREYRKGNWT LQETMILITA KKLDDERRNK VTLAPPTDPT ARKGGELRWK  120
WVENYCWSHG CHRSQNQCND KWDNLLRDYK KVREYESRAC DQQSQIPSYW KMEKHERKDN  180
NLPSNMAFEV YQALNDVVQR KFSQRPVISN TTPTTTTTTA TTTTPLVALP PAPPPSSAVP  240
ALPPPPPTTA TNSSPAVSES SSSGTESSEK KEKTEAKRRK MKDNIERSAT MLAQTLQRCE  300
EQREIRHQEV MEVQKRCLQI EEARNHIHRQ GISDVVAAIA NLSAEIDDRE RRRSEGYECS  360
YNGEEVRMLK QQNEAMQAEV MNVKTELSQL RDQMPSLMQT MMHNMLHNIP PPPPPSMDPS  420
GSGGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.11e-46Trihelix family protein