PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957220.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 416aa MW: 47210.6 Da PI: 9.0501

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957220.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.9	3.6e-20	79	173	2	86
trihelix 2 WtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt qe++ Li+a++ ++er ++ + +W++v ++++++g++rs++qC++kw+nl ++ykk++e e++ ++++s++p + ++ XP_022957220.1 79 WTLQETMILITAKKLDDERRNKVTlapptdptarkGGELRWKWVENYCWSHGCHRSQNQCNDKWDNLLRDYKKVREYESRA-CDQQSQIPSYWKM 172 ************9999999863444444554447899************************************85.99999****** PP trihelix 86 e 86 e XP_022957220.1 173 E 173 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MPKPCRILRQ HHRSHRISSS STTPPPPPPP XXXHHHHQQQ QLLHLPLIHG GAARINTAAA 60 AAATSSSTVI VREYRKGNWT LQETMILITA KKLDDERRNK VTLAPPTDPT ARKGGELRWK 120 WVENYCWSHG CHRSQNQCND KWDNLLRDYK KVREYESRAC DQQSQIPSYW KMEKHERKDN 180 NLPSNMAFEV YQALNDVVQR KFSQRPVISN TTPTPLVALP PAPPPSSAVP ALPPPPPTTA 240 TNSSPAVSES SSSGTESSEK KEKTEAKRRK MKDNIERSAT MLAQTLQRCE EQREIRHQEV 300 MEVQKRCLQI EEARNHIHRQ GISDVVAAIA NLSAEIDDRE RRRSEGYECS YNGEEVRMLK 360 QQNEAMQAEV MNVKTELSQL RDQMPSLMQT MMHNMLHNIP PPPPPSMDPS GSGGDA

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MPKPCRILRQ HHRSHRISSS STTPPPPPPP XXXHHHHQQQ QLLHLPLIHG GAARINTAAA  60
AAATSSSTVI VREYRKGNWT LQETMILITA KKLDDERRNK VTLAPPTDPT ARKGGELRWK  120
WVENYCWSHG CHRSQNQCND KWDNLLRDYK KVREYESRAC DQQSQIPSYW KMEKHERKDN  180
NLPSNMAFEV YQALNDVVQR KFSQRPVISN TTPTPLVALP PAPPPSSAVP ALPPPPPTTA  240
TNSSPAVSES SSSGTESSEK KEKTEAKRRK MKDNIERSAT MLAQTLQRCE EQREIRHQEV  300
MEVQKRCLQI EEARNHIHRQ GISDVVAAIA NLSAEIDDRE RRRSEGYECS YNGEEVRMLK  360
QQNEAMQAEV MNVKTELSQL RDQMPSLMQT MMHNMLHNIP PPPPPSMDPS GSGGDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31310.1	1e-46	Trihelix family protein