PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957252.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 96aa    MW: 10776.3 Da    PI: 8.8262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957252.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.1e-0622641555
                    HHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksLq 55
                    +i + +++L +l+P+ +  + +s  +s + +L++++++I+sL+
  XP_022957252.1 22 QIADLISKLHQLIPQiRNrRSSSSTVSASKVLQETCNFIRSLE 64
                    899************9886666666****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSTRTPRSRR CPLPSTTISD HQIADLISKL HQLIPQIRNR RSSSSTVSAS KVLQETCNFI  60
RSLEREVDDL SERLSELLAS TDPETAQAAI LRSLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.19e-29bHLH family protein