PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957276.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 490aa    MW: 55748.7 Da    PI: 5.7161
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957276.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like63.73.4e-20220272255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      r++W+++LH++F ea+++L G+ k  Pk il++m+ ++Ltl +v+SHLQk+++
  XP_022957276.1 220 SRIVWSSKLHRKFTEALSKL-GNRKSSPKIILKMMNEPSLTLRQVASHLQKFKS 272
                     79******************.9******************************86 PP
2Myb_DNA-binding34.26e-11223271348
                      SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       W+  ++ ++ +a  +lG++  ++k I ++m+   +tl q+ s++qk++
   XP_022957276.1 223 VWSSKLHRKFTEALSKLGNRksSPKIILKMMNePSLTLRQVASHLQKFK 271
                      6**********************************************96 PP
3Response_reg34.41.1e-12151181107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH.HHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell.kekd...pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                     vl+vd ++  ++ ++++l++  y +v++ +++++al+++ + ++   ++l++     ++m++l +l    +    +pii+++ + ++++  +a+ 
  XP_022957276.1  15 VLVVDHDKHSLQSIASMLQNFSY-KVTTIEEADAALTMIiE-EKhepFNLVMANATESNMNALSILN---Q--TGIPIILMSPERDMKTSGRAIA 102
                     89*********************.**************963.44367*************9998875...3..46******************** PP

                     TTESEEEESS--HHHH CS
    Response_reg  92 aGakdflsKpfdpeel 107
                       +  fl+Kp+++e++
  XP_022957276.1 103 EWGYHFLEKPISMEDI 118
                     ************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MGSKGIPSFA KGIHVLVVDH DKHSLQSIAS MLQNFSYKVT TIEEADAALT MIIEEKHEPF  60
NLVMANATES NMNALSILNQ TGIPIILMSP ERDMKTSGRA IAEWGYHFLE KPISMEDIEL  120
VWQIVYRKIR NPRARNLGEN TNQAKKSHIG GMFGRVLNVA GGVEWNPIEE EEEEEEEEEE  180
KEKCGDREAR LKPSATVFDY LETMNMEEKT NRNERTHKRS RIVWSSKLHR KFTEALSKLG  240
NRKSSPKIIL KMMNEPSLTL RQVASHLQKF KSQVKHLNKM TESDASTSLG KNQVQELPTK  300
RNSMTNILGQ PTYSSNITGN QLRQLQVPSC LNAHRLPSQD VFNCHLRMMN QQNSCSYKST  360
YGGFEGTNLV VDDNNRIFTD ELYMNESLSH SNFQYFGGDH EDCPFLSADN HYPHAVQELE  420
FSQNMAGCYD VDNIRSGAHS VIAGSLNQNV ALKELDDLLN NTEEDPMVYC CYDGKMNSFD  480
IDQYSEWLNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.13e-33ARR-B family protein