PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957294.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 545aa MW: 61589.3 Da PI: 4.2643

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957294.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.1e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk+l + ++i+ vdiyk+ePwdLp+ k+++++ ewyfFs+ dkky++++r+nrat++gyWk+tgkd++v XP_022957294.1 9 LAPGFRFHPTDEEIVRYYLRRKVSGKPLCF-DTISVVDIYKSEPWDLPEksKLRTRDLEWYFFSPLDKKYSNSSRTNRATENGYWKTTGKDRPVR 102 579**********************988.89**********95246666777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022957294.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL 60 RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE 180 NDEELTLPGE EAVVNEGLVN VDDDMHLEVD EIVQQYFDGE LPFEYDQPLS NYLQDTINPV 240 ELPNVLVEND NKPLELQHNH GFFQLPEQYE MGGNSEKDEC FAESSDNLKD EDIDYLLDEP 300 YPSVPDDLAL NEELFLEAND LSSPVEIDPT GVDILEEYLT FFDADDNLQL SFDPTELLGS 360 EVPISGQTIP EEKVNEVAEN EFLATKQTSV ASINDASTSK LNTQADEAGS DSTLPFLKRV 420 SYLLGDIPAP PAFASEYPSK DMAIRLNSAA QTSSSIHRTA GMIHISNSTS NYDLVNTLYV 480 KNGDVDLILF SARHHHHGEN DEMIDVLSQK NGIMGTRGGF LFFFLLFWVL ILSVSYKVGS 540 CIYSH

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL  60
RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE  180
NDEELTLPGE EAVVNEGLVN VDDDMHLEVD EIVQQYFDGE LPFEYDQPLS NYLQDTINPV  240
ELPNVLVEND NKPLELQHNH GFFQLPEQYE MGGNSEKDEC FAESSDNLKD EDIDYLLDEP  300
YPSVPDDLAL NEELFLEAND LSSPVEIDPT GVDILEEYLT FFDADDNLQL SFDPTELLGS  360
EVPISGQTIP EEKVNEVAEN EFLATKQTSV ASINDASTSK LNTQADEAGS DSTLPFLKRV  420
SYLLGDIPAP PAFASEYPSK DMAIRLNSAA QTSSSIHRTA GMIHISNSTS NYDLVNTLYV  480
KNGDVDLILF SARHHHHGEN DEMIDVLSQK NGIMGTRGGF LFFFLLFWVL ILSVSYKVGS  540
CIYSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-130	NAC family protein