PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957302.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 544aa MW: 61461.2 Da PI: 4.2643

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957302.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.1e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk+l + ++i+ vdiyk+ePwdLp+ k+++++ ewyfFs+ dkky++++r+nrat++gyWk+tgkd++v XP_022957302.1 9 LAPGFRFHPTDEEIVRYYLRRKVSGKPLCF-DTISVVDIYKSEPWDLPEksKLRTRDLEWYFFSPLDKKYSNSSRTNRATENGYWKTTGKDRPVR 102 579**********************988.89**********95246666777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022957302.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL 60 RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE 180 NDEELTLPGE EAVVNEGLVN VDDDMHLEVD EIVQYFDGEL PFEYDQPLSN YLQDTINPVE 240 LPNVLVENDN KPLELQHNHG FFQLPEQYEM GGNSEKDECF AESSDNLKDE DIDYLLDEPY 300 PSVPDDLALN EELFLEANDL SSPVEIDPTG VDILEEYLTF FDADDNLQLS FDPTELLGSE 360 VPISGQTIPE EKVNEVAENE FLATKQTSVA SINDASTSKL NTQADEAGSD STLPFLKRVS 420 YLLGDIPAPP AFASEYPSKD MAIRLNSAAQ TSSSIHRTAG MIHISNSTSN YDLVNTLYVK 480 NGDVDLILFS ARHHHHGEND EMIDVLSQKN GIMGTRGGFL FFFLLFWVLI LSVSYKVGSC 540 IYSH

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL  60
RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE  180
NDEELTLPGE EAVVNEGLVN VDDDMHLEVD EIVQYFDGEL PFEYDQPLSN YLQDTINPVE  240
LPNVLVENDN KPLELQHNHG FFQLPEQYEM GGNSEKDECF AESSDNLKDE DIDYLLDEPY  300
PSVPDDLALN EELFLEANDL SSPVEIDPTG VDILEEYLTF FDADDNLQLS FDPTELLGSE  360
VPISGQTIPE EKVNEVAENE FLATKQTSVA SINDASTSKL NTQADEAGSD STLPFLKRVS  420
YLLGDIPAPP AFASEYPSKD MAIRLNSAAQ TSSSIHRTAG MIHISNSTSN YDLVNTLYVK  480
NGDVDLILFS ARHHHHGEND EMIDVLSQKN GIMGTRGGFL FFFLLFWVLI LSVSYKVGSC  540
IYSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-132	NAC family protein