PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957318.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 312aa MW: 35285.9 Da PI: 9.3952

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957318.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.6	3e-40	76	199	2	130
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssaseceaesssssasnsssgkaaks 93 g+kdrhski+T++g+RdRR+Rls+e+a+rfFdLqd+LGfdk+skt+eWL++++ aikel + +++s++++ + ++s + + XP_022957318.1 76 SGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKfllEANSSEST----LVTNVS----LYHDHD 162 579***********************************************************66533333222....222222....233333 PP TCP 94 aakskksqksaasalnlakesrakarararertrekm 130 + ++ ++ k+ + + ++kesr kararar rt+ k XP_022957318.1 163 HDQEVPRGKKRRKLRIVDKESRFKARARARARTKAKL 199 4445555555555678999************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MLASSIDNSI QIHDERFQQT IDCYNFNPFL DDHDFIFGHI LYPEIGLGSA NNTSNDTTTA 60 HKASSQDNPI SRKRSSGAKD RHSKICTSKG PRDRRMRLSL EIARRFFDLQ DMLGFDKASK 120 TVEWLFTKSR SAIKELREKF LLEANSSEST LVTNVSLYHD HDHDQEVPRG KKRRKLRIVD 180 KESRFKARAR ARARTKAKLI RARFEISKSN FEGNPVGVCK MEDVIEESST KSKSVANFPQ 240 NLGSKAKNSA SLISNHCYDK RVSKESCSEI HLLPCSSMDM GTLSLDTMRA SPAGLKLSEL 300 DEVDGVLIFY GE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	175	KKRRK
2	171	198	KKRRKLRIVDKESRFKARARARARTKAK
3	172	199	KKRRKLRIVDKESRFKARARARARTKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-31	TCP family protein