PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957350.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 314aa MW: 35954.1 Da PI: 8.3212

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957350.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.8	4.3e-06	21	41	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg F+ + +Lk+H+++H XP_022957350.1 21 CQECGAEFKKPAYLKQHMQSH 41 *******************99 PP
2	zf-C2H2	15.1	6.9e-05	47	71	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C s++rk++L+rH+ H XP_022957350.1 47 YICSidGCEASYRRKDHLTRHLLHH 71 899999***************9987 PP
3	zf-C2H2	21.4	6.4e-07	114	138	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk+F+ s+L++H +H XP_022957350.1 114 FVCPedGCGKVFRYASQLQKHEHSH 138 89*******************9888 PP
4	zf-C2H2	19.7	2.2e-06	207	230	3	23
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C+k+Fs+ snL++H+++ H XP_022957350.1 207 CTheGCSKVFSTISNLHQHMKVvH 230 88889****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MESGKHNDGG DKTINGKSNI CQECGAEFKK PAYLKQHMQS HSLERPYICS IDGCEASYRR 60 KDHLTRHLLH HQGLIIKCPI EGCSREFAYI SCVNRHLKEC HEGGAPPEEC QKQFVCPEDG 120 CGKVFRYASQ LQKHEHSHFK LDSIEACCAE PGCMKTFTNK KCLQAHMQSF HQYINCEICG 180 EKKLRKNMKQ HLRQKHESEG PPEAIPCTHE GCSKVFSTIS NLHQHMKVVH LGQKPFACGF 240 PGCGMRFGYK HVRDNHEKKG QHVYTNGDFE AADEQFRSKP RGGRKRIRPT VEMLIRKRIT 300 PPSELDFITM DEEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-119	C2H2 family protein