PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957377.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 349aa MW: 39251.4 Da PI: 8.451

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957377.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.6e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+kv++++l + e ik++diyk++PwdLpk ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_022957377.1 14 MLPGFRFHPTDEELVGFYLKRKVQQRPLLI-ELIKQIDIYKYDPWDLPKLGGSGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579**********************999.89***********87778999**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg+ktdW+mhe+rl XP_022957377.1 108 dGTKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEERNEGEKG EELMLPGFRF HPTDEELVGF YLKRKVQQRP LLIELIKQID IYKYDPWDLP 60 KLGGSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV 120 FYKGRAAKGV KTDWMMHEFR LPSLTHPSPT KRLVDKTIPP NDSWAICRIF KKTNSTAQRA 180 LSLSSNIPPL SDNAFTKNDT FSPTKPTLPS FETLTQSSIS NAYPFDFVAS CKPFNTQTTN 240 TFAHLPILAE PSPNATEQDK SRVDLSSILL NMSSSVLGDF GMKPIADTID LHANQQFINN 300 YPQPFSHEMQ AGGDQFGAMM RSSVGCPFVW DSSSSSCPSE VSTTTNCYT

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEERNEGEKG EELMLPGFRF HPTDEELVGF YLKRKVQQRP LLIELIKQID IYKYDPWDLP  60
KLGGSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV  120
FYKGRAAKGV KTDWMMHEFR LPSLTHPSPT KRLVDKTIPP NDSWAICRIF KKTNSTAQRA  180
LSLSSNIPPL SDNAFTKNDT FSPTKPTLPS FETLTQSSIS NAYPFDFVAS CKPFNTQTTN  240
TFAHLPILAE PSPNATEQDK SRVDLSSILL NMSSSVLGDF GMKPIADTID LHANQQFINN  300
YPQPFSHEMQ AGGDQFGAMM RSSVGCPFVW DSSSSSCPSE VSTTTNCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-100	NAC family protein