PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957438.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 486aa MW: 53252.3 Da PI: 8.2843

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957438.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.8	9.5e-33	204	260	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkg efprsYY+Ct+++Cpv+kkvers +++v+ei+Y+geHnh+ XP_022957438.1 204 DDGYNWRKYGQKQVKGGEFPRSYYKCTHPNCPVRKKVERSL-EGQVTEIIYKGEHNHK 260 8**************************************.*************8 PP
2	WRKY	106.2	1.7e-33	378	436	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vkg+++prsYY+Ct++gC+v+k+ver++ dpk+v++tYeg+Hnh+ XP_022957438.1 378 LDDGYRWRKYGQKIVKGNPYPRSYYKCTTPGCNVRKHVERASMDPKAVITTYEGKHNHD 436 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MGDDEEEPPP SSPQPPSKLK PRPLRPTINL PPRTSMESLF SGGLGLGFGF SPGPMTLVSS 60 FFSDPDDCKS FSQLLAGAMT SPVAVPPLES EFKGPPGLLD SPGLLSPSQG PFGMTHQQAL 120 AQVTMQAAEA YSHKQIQAAS LSPSVAPFAS SLELSTTFLG EKTKEQPMQP PFPNAGVASK 180 EVLDISQSEQ RVQSSLCTVG RPGDDGYNWR KYGQKQVKGG EFPRSYYKCT HPNCPVRKKV 240 ERSLEGQVTE IIYKGEHNHK QPQPNKRGKD VGNSNGYSST HGNPELCSQV QSKLNELKDV 300 SSIKNDQESS HVTHEKLSGT SDGEGGSEIE TGVNRKDDDE PDAKRRNTEV RLPEPASSHR 360 TLAESRIIVQ TTSEVDLLDD GYRWRKYGQK IVKGNPYPRS YYKCTTPGCN VRKHVERASM 420 DPKAVITTYE GKHNHDVPAG KISSHRSVNS NVPQLKSHNI SNKNNDHGNS RHQHAGVLRL 480 KEEQIT

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MGDDEEEPPP SSPQPPSKLK PRPLRPTINL PPRTSMESLF SGGLGLGFGF SPGPMTLVSS  60
FFSDPDDCKS FSQLLAGAMT SPVAVPPLES EFKGPPGLLD SPGLLSPSQG PFGMTHQQAL  120
AQVTMQAAEA YSHKQIQAAS LSPSVAPFAS SLELSTTFLG EKTKEQPMQP PFPNAGVASK  180
EVLDISQSEQ RVQSSLCTVG RPGDDGYNWR KYGQKQVKGG EFPRSYYKCT HPNCPVRKKV  240
ERSLEGQVTE IIYKGEHNHK QPQPNKRGKD VGNSNGYSST HGNPELCSQV QSKLNELKDV  300
SSIKNDQESS HVTHEKLSGT SDGEGGSEIE TGVNRKDDDE PDAKRRNTEV RLPEPASSHR  360
TLAESRIIVQ TTSEVDLLDD GYRWRKYGQK IVKGNPYPRS YYKCTTPGCN VRKHVERASM  420
DPKAVITTYE GKHNHDVPAG KISSHRSVNS NVPQLKSHNI SNKNNDHGNS RHQHAGVLRL  480
KEEQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.2	1e-129	WRKY family protein