PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957512.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 339aa MW: 37674.6 Da PI: 10.1621

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957512.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.7	9.7e-16	60	142	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v +L+ea+++++ +r+klk+++We+v++++ ++ f++spk qCk+k+e+++kry+ + +++ + ++p++++l+ XP_022957512.1 60 EWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARHVsSRADFTKSPKtqtQCKNKIESMKKRYRSESASAAS-------SWPLYHRLH 142 5***********************************756667766543339***********999997.......49*9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MEIKPTPSSP LNSETTSPSL LFNHHHHHLP SAIDAAAETP SPKKPPASTT GAGDRLKRDE 60 WSEGAVSTLL EAYESKWVLR NRAKLKGHDW EDVARHVSSR ADFTKSPKTQ TQCKNKIESM 120 KKRYRSESAS AASSWPLYHR LHLLLRGNTL TPPPPPPTPV ILLDPPPPPP APPPFLPAQN 180 SHGSNGGDRI NPKEDGVDNG RRDESDELSE KSKKMVIETD SSTPAIVYSD KDKVSMRPKQ 240 QTKMKNTKKK NKSTRLSAED SLEQIAGSIR WLAEVVVRSE QARMEMIKDI EKMRAEAEAK 300 RGEMDLKRTQ IIANTQLEIA KLFASATNPI DSSPRIGRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	5e-85	Trihelix family protein