PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957640.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 241aa    MW: 26272.7 Da    PI: 8.8111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957640.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.7e-2193143255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+++g  +r++lg+++ta eAaka+++a+ k++g
  XP_022957640.1  93 HYRGVRRRP-WGKFAAEIRDPNKRG--ARVWLGTYDTAIEAAKAYDRAAFKMRG 143
                     69*******.**********96655..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAYGDDASTL DFIRQHLLSD FNSIEAFASN LDFINNNGLT PQIPAAPSKI GHRRPSLNVM  60
IPPKTHSVQS PAAATATVTT SSEVKSDVGL SQHYRGVRRR PWGKFAAEIR DPNKRGARVW  120
LGTYDTAIEA AKAYDRAAFK MRGSKAILNF PLEAGKEAEE PPSTAAVGRK RRRESEVGEM  180
ENKVVKKEES SETNEIGVPA AICPLTPSCW APVWDNDGKG IFSVPPLSPH PLMGYPQCTV  240
T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169173RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.14e-58ERF family protein