PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957729.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 466aa MW: 51670.4 Da PI: 4.4412

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957729.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87	1.4e-27	140	205	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_022957729.1 140 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 205 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSGSPAPNSS GHPPEQIMLS LKRHLPFSSI KPPFASPGDY HRFALDSPLA DQQLDSIVVK 60 SPQLKRKSEA ADYEAESTDR AAGPRFTEVV NSSHQTPVSV KGGKGNKSRL TKCSRSGPQT 120 PMSNVGSPYA NNLTPVGPCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA DTLEVQKRRI 180 YDITNVLEGI GLIEKKLKNR IQWKGLDVSR SGDVDDNYAG LQLHVQAEVE NLSMEENGLD 240 EQIREMQERL RDLSEEENNQ RWLFVTEEDI KELPCFQNET LIAIKAPHGT TLEVPDPDEA 300 VDYPQRRYRI VLRSTMGPID VYLVSQFEEK FEEINGVEVS PSLPSSSGFN ETPAATLVTD 360 DTRGKEIETR EQDVNRMCSD LNASQDFVGG IMKIVPSAVD SDADYWLLSD ADVSITDMWR 420 TEPGVEWNEL STFHEDYSID NVSTPQTQNP PSNNSPDAPS ANPSSS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSGSPAPNSS GHPPEQIMLS LKRHLPFSSI KPPFASPGDY HRFALDSPLA DQQLDSIVVK  60
SPQLKRKSEA ADYEAESTDR AAGPRFTEVV NSSHQTPVSV KGGKGNKSRL TKCSRSGPQT  120
PMSNVGSPYA NNLTPVGPCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA DTLEVQKRRI  180
YDITNVLEGI GLIEKKLKNR IQWKGLDVSR SGDVDDNYAG LQLHVQAEVE NLSMEENGLD  240
EQIREMQERL RDLSEEENNQ RWLFVTEEDI KELPCFQNET LIAIKAPHGT TLEVPDPDEA  300
VDYPQRRYRI VLRSTMGPID VYLVSQFEEK FEEINGVEVS PSLPSSSGFN ETPAATLVTD  360
DTRGKEIETR EQDVNRMCSD LNASQDFVGG IMKIVPSAVD SDADYWLLSD ADVSITDMWR  420
TEPGVEWNEL STFHEDYSID NVSTPQTQNP PSNNSPDAPS ANPSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-153	E2F/DP family protein