PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957863.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 297aa    MW: 32577.4 Da    PI: 6.5105
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957863.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34.1e-142673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l  +    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_022957863.1 26 KGLWSPEEDDKLRTYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 73
                     678*******************************************97 PP
2Myb_DNA-binding49.41e-1579122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E++l ++++ +lG++ W+ Ia++++ gRt++++k++w++
   XP_022957863.1  79 RGAFSPQEEDLVIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 122
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MRKPDAAAPG GGCGGGGPPA ATKLRKGLWS PEEDDKLRTY MLNNGQGCWS DVARNAGLQR  60
CGKSCRLRWI NYLRPDLKRG AFSPQEEDLV IHLHSLLGNR WSQIAARLPG RTDNEIKNFW  120
NSTIKKRLKN LSSTPSPNTS SDSHSGDSKS NLFATFVLGQ DQQQQQNSID FPIFAADPSP  180
SVIALDSFPL LSTTHGVPFF PTGGVEMGFY REDDSFFNLP LLQSVNTTTT TATATAATGG  240
ETKHSNYLIN NNPKMESMNG GVGANFIHEE FSMGEWELED LMKDVPSSFP CLNFQVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.11e-67MYB family protein