PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958007.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 300aa    MW: 32893.1 Da    PI: 6.9987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958007.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.1e-18105155256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr++  +g+WvAeIr p +   r r++lg+++++e Aa a++ a+ kl+ge
  XP_022958007.1 105 VYRGVRQRQ-WGKWVAEIRLPQN---RMRVWLGTYDSPETAAYAYDCAACKLRGE 155
                     7*****999.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
METMTNGGTL QFTDVSTALS NLILTAGGNT LDSIFSHCDN FSCSVIDGVD FDPAVGSSVY  60
LRQREVLQRF SQERKANGSR DLFAKAYELL YSGCGAAVSG GKRKVYRGVR QRQWGKWVAE  120
IRLPQNRMRV WLGTYDSPET AAYAYDCAAC KLRGEYARLN FPNLKDLKSD LGTDEFVKLS  180
GLRKLVDAKI QAIIQKIKGK GKKKDCRRIG GDLGSGSCSS SSSSVSLPPA VVEMTEEWSW  240
ERVSPVGAAE DGLWNFENSP RAGSVDCLTA TAAAGSETEW YSLEKMPSFD AEQIWDVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.14e-41ERF family protein