PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958027.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 471aa MW: 52770.5 Da PI: 5.3182

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958027.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7.1e-28	235	288	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022958027.1 235 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 288 6799***************.******************************8 PP
2	Myb_DNA-binding	42.4	1.6e-13	238	287	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022958027.1 238 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 287 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MLMCKGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLRNIW 60 QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNNGVLEDTE VLSWIQDVVW EQEKPEGSGI 120 SQLNQGSSLQ GCWESENQMN CPMETDSSDK DVQSNFIETT SHDLVCEDTL QEGQPRLSGK 180 VMLEGDRNFV VGLNAESDLY LPLQNKSGVK SGPSAAEHSI QGSDVNPSAS SKARKTKVDW 240 SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQR KHVMHREENP 300 TRYSMQTNHS PPIMAYPSSY PYCGISMSTV YRTWTQTNGH PANVNMRGPP PDYRYWPQPG 360 TQPWNSYAGM QADAWGCPVM LPSRAPYFSY PQQSSSSHNV YTANKSYGTP QSSFDLQPDE 420 EVIDEIVNEV MRKPRSSLPL GLKPPAEILV EELPRQGIST LTPQINAFNP P

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MLMCKGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLRNIW  60
QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNNGVLEDTE VLSWIQDVVW EQEKPEGSGI  120
SQLNQGSSLQ GCWESENQMN CPMETDSSDK DVQSNFIETT SHDLVCEDTL QEGQPRLSGK  180
VMLEGDRNFV VGLNAESDLY LPLQNKSGVK SGPSAAEHSI QGSDVNPSAS SKARKTKVDW  240
SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQR KHVMHREENP  300
TRYSMQTNHS PPIMAYPSSY PYCGISMSTV YRTWTQTNGH PANVNMRGPP PDYRYWPQPG  360
TQPWNSYAGM QADAWGCPVM LPSRAPYFSY PQQSSSSHNV YTANKSYGTP QSSFDLQPDE  420
EVIDEIVNEV MRKPRSSLPL GLKPPAEILV EELPRQGIST LTPQINAFNP P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.5	5e-59	ARR-B family protein