PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958218.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 500aa MW: 55923.7 Da PI: 7.5925

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958218.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.6e-19	22	77	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++q+ +Le+++++++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_022958218.1 22 KKRKLKTPTQVIALEKFYNEHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 77 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MEEELGHVMH SEENKDSTEK NKKRKLKTPT QVIALEKFYN EHKYPTEEMK SQLAEQLGLT 60 EKQISGWFCH RRLKDKRFCE TYPSVRQDRS SGFIQDLGSG LAQDSCGSTK NGDYWYIDPR 120 EVESQKPYGH ELATDNVLER RSQYTENVSN MDNTPSESSS SLKDRVLSQS ENPYDTEVSQ 180 YLTHEGAIPS SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPPLGVEF 240 QPLPPGAFES PAKGPIHDSY YTGNPILPRS PEISTTKKQR ALGSRYEVHS SNMSSQDSYM 300 EEAVPTSATC RPECHDKNSM NQLKKGSNYY NKTDPFPRPN SPLNMYEESG GLTLSSSSKR 360 DHRINSSYNI PSSRSDSVSN NHGSCSSKVA NEQTEMQLHN HGCVGSKSFY RSGKTMPKEM 420 FNGEENTVNG SSDPVRGKIL PTKEMAVANR CPLDFPRSNY AAKSSFSGKP GRKNHARRST 480 TEMPYSFTVG EAEDTSSSLD

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MEEELGHVMH SEENKDSTEK NKKRKLKTPT QVIALEKFYN EHKYPTEEMK SQLAEQLGLT  60
EKQISGWFCH RRLKDKRFCE TYPSVRQDRS SGFIQDLGSG LAQDSCGSTK NGDYWYIDPR  120
EVESQKPYGH ELATDNVLER RSQYTENVSN MDNTPSESSS SLKDRVLSQS ENPYDTEVSQ  180
YLTHEGAIPS SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPPLGVEF  240
QPLPPGAFES PAKGPIHDSY YTGNPILPRS PEISTTKKQR ALGSRYEVHS SNMSSQDSYM  300
EEAVPTSATC RPECHDKNSM NQLKKGSNYY NKTDPFPRPN SPLNMYEESG GLTLSSSSKR  360
DHRINSSYNI PSSRSDSVSN NHGSCSSKVA NEQTEMQLHN HGCVGSKSFY RSGKTMPKEM  420
FNGEENTVNG SSDPVRGKIL PTKEMAVANR CPLDFPRSNY AAKSSFSGKP GRKNHARRST  480
TEMPYSFTVG EAEDTSSSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	3e-91	HB-other family protein