PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958330.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 261aa MW: 28524.9 Da PI: 6.8968

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958330.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.0004	106	128	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H XP_022958330.1 106 YECKTCNRSFPSFQALGGHRASH 128 99**********99999998887 PP
2	zf-C2H2	14.4	0.00011	180	202	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_022958330.1 180 HECSICGLEFSSGQALGGHMRRH 202 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
METPQEFMGS NDQIHIIPVK SHRNKRMKLL SGGADATSSS SCGGGGGAGD EFAASSSVSD 60 EVSTEEEEDM ANCLILLAQG DTHRRASQIT NKRLNFEKPK AGFYVYECKT CNRSFPSFQA 120 LGGHRASHKK PKPITAVEES EEPQQVNKAI PIAAAAVVVQ IPIKTETTTN SQTQKSGKIH 180 ECSICGLEFS SGQALGGHMR RHRTTAVSTN TDQHDHKRRN ILELDLNLPA PEEDLRETKF 240 QFTTTPQTIV FAAPTLVDCH Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	7e-50	C2H2 family protein