PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958336.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 433aa MW: 49884.7 Da PI: 6.903

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958336.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.9e-51	60	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_022958336.1 60 VPPGFRFHPTEEELLHYYLRKKVGFQKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKII 153 69**************************.9***********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +gl+ktLvfykgrap+g+k+dW+mheyrl XP_022958336.1 154 YT-GSRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 188 9.999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MIPSLHFTLN FALQTPLTLS FSLTQTKTTS SQTHTHKHTH TACFMAEQDM TLSLNGHSQV 60 PPGFRFHPTE EELLHYYLRK KVGFQKIDLD VIRDVDLNKL EPWDIQEKCK IGSTPQNDWY 120 FFSHKDKKYP TGTRTNRATA AGFWKATGRD KIIYTGSRRI GLRKTLVFYK GRAPHGQKSD 180 WIMHEYRLDD SDRDNNICNS IGEAQLAEDG WVVCRVFKKK NYHKRIDSPK TSPTSMDSEV 240 HLQNSNNEEG VLDQILQYMG RTCKLEMESF SNFNNNNIQS SRVILSPKNN NTEDHHQQQQ 300 QRTIDKSFMH LPRLDSPTTI PSIIPLHQLE TFDHNIIFNH ELLPETTDPS PEPVRGSPVV 360 KLNNWVAFDR LVASQLNGHE ERTIEDDEDE QQQHHHDMQV SSRGLGYGHE NDIWGFTKSS 420 SPSSLDPLSH LSV

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MIPSLHFTLN FALQTPLTLS FSLTQTKTTS SQTHTHKHTH TACFMAEQDM TLSLNGHSQV  60
PPGFRFHPTE EELLHYYLRK KVGFQKIDLD VIRDVDLNKL EPWDIQEKCK IGSTPQNDWY  120
FFSHKDKKYP TGTRTNRATA AGFWKATGRD KIIYTGSRRI GLRKTLVFYK GRAPHGQKSD  180
WIMHEYRLDD SDRDNNICNS IGEAQLAEDG WVVCRVFKKK NYHKRIDSPK TSPTSMDSEV  240
HLQNSNNEEG VLDQILQYMG RTCKLEMESF SNFNNNNIQS SRVILSPKNN NTEDHHQQQQ  300
QRTIDKSFMH LPRLDSPTTI PSIIPLHQLE TFDHNIIFNH ELLPETTDPS PEPVRGSPVV  360
KLNNWVAFDR LVASQLNGHE ERTIEDDEDE QQQHHHDMQV SSRGLGYGHE NDIWGFTKSS  420
SPSSLDPLSH LSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-105	NAC family protein