PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958377.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 232aa MW: 26452 Da PI: 8.6789

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958377.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.9e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++ ++ +G+g +W + +++ g++R++k+c++rw++yl XP_022958377.1 14 KGPWSPEEDTKLKHFIQTYGTGgNWISLPHKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.4	6.1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ +++ G++ W+ Ia+ + gRt++++k++w++ XP_022958377.1 69 GEFSAEEDRIICTLFATIGSR-WSIIAAQLS-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDTKLKHFIQ TYGTGGNWIS LPHKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSAEEDRIIC TLFATIGSRW SIIAAQLSGR TDNDIKNYWN TKLKKKLVGM 120 ISSSPNTYTQ SLTHQSTSLN IPNPMAEPSP TSNIINGSLV GNPFEQWRYG ALKMNEMQMG 180 FEFGSGLVTS SNGFEENHGK LMSNNESEVF LKMEEEEEKI KREVEEKYFY YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	8e-75	MYB family protein