PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958419.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 337aa    MW: 37042.4 Da    PI: 4.5088
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958419.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1162.4e-36251152101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g+k ll++
  XP_022958419.1  25 FLTKTYQLVDDPDVDDLISWNEDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKALLRD 110
                     9*****************************************************************99.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_022958419.1 111 IQRRK 115
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAPSPAEPIG DSGTGDSQRS IPTPFLTKTY QLVDDPDVDD LISWNEDGST FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF KRGEKALLRD IQRRKVALSV  120
AAPATPASVS VPLVTVAASP AVAACVISPV NSAEEQVTSS NSSPMEFQRG TSCCTTPELV  180
RENERLRKEN MQLSHELTQL KGLCNNILSL MTNYASGHQQ LESVSVRDGK ALDLLPARQM  240
MDDEGAVSDG IQEVRLKVEE AVAVATAEGR TPKLFGVSIG VKRVRREEDD EEMVGPNHVQ  300
SEECETGSEI KAEPLDENSE NPEGSASQWL ELGNQGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.11e-103HSF family protein