PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958541.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 170aa    MW: 18218.4 Da    PI: 4.4709
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958541.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.1e-161967255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r ++  g+Wv+eIr+p++   ++r++lg+f t+e+Aa a++ a+++l+g
  XP_022958541.1 19 LYRGIR-CR-GGKWVSEIREPRK---TTRIWLGTFPTPEMAATAYDVAALALRG 67
                    69***9.55.7*********843...5*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MASLTSSSSS SSSTTKHPLY RGIRCRGGKW VSEIREPRKT TRIWLGTFPT PEMAATAYDV  60
AALALRGDQA ILNFPSSVAS YPVPASTSPL DIRNAASAAA NALNKVETCS TNIEDSGNTA  120
SFVDEEEIFG MPSLLADMAE GMMVSPPRMN SPPLSDDNSD GTECLWNYFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-33ERF family protein