PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958688.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 169aa    MW: 18889.5 Da    PI: 8.9258
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958688.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY216.58.1e-6761585169
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                      +se+vCyv+CnfCntilavsvP +s+f++vtvrCGhCt+llsvn+  + q+l+ +++   + +++    l + e++ k   +++++ s+  s  
  XP_022958688.1   6 MASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCTNLLSVNMGASLQVLPPQED---HKQPQ----LTSPEDSSKDRGSSSSKCSKIGSL- 92 
                     689**************************************************99886...22222....222222222222222222222222. PP

           YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                        e+ +++  r+pp irPPekrqr+Psaynrfik eiqrika+nPdishreafs+aaknWah+P+ih g
  XP_022958688.1  93 ---ESGERDQHRIPP-IRPPEKRQRIPSAYNRFIKVEIQRIKANNPDISHREAFSTAAKNWAHLPHIHLG 158
                     ...344555566667.9***************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MSLDMMASER VCYVHCNFCN TILAVSVPCN SMFTLVTVRC GHCTNLLSVN MGASLQVLPP  60
QEDHKQPQLT SPEDSSKDRG SSSSKCSKIG SLESGERDQH RIPPIRPPEK RQRIPSAYNR  120
FIKVEIQRIK ANNPDISHRE AFSTAAKNWA HLPHIHLGQK LDGNNKQSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.19e-70YABBY family protein