PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958689.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 138aa MW: 15468.5 Da PI: 10.2978

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958689.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	162.9	2.4e-50	1	127	31	169
YABBY 31 lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrv 125 +f++vtvrCGhCt+llsvn+ + q+l+ +++ + +++ l + e++ k +++++ s+ s e+ +++ r+pp irPPekrqr+ XP_022958689.1 1 MFTLVTVRCGHCTNLLSVNMGASLQVLPPQED---HKQPQ----LTSPEDSSKDRGSSSSKCSKIGSL----ESGERDQHRIPP-IRPPEKRQRI 83 699**********************99886...22222....222222222222222222222222....344555566667.9***** PP YABBY 126 PsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 Psaynrfik eiqrika+nPdishreafs+aaknWah+P+ih g XP_022958689.1 84 PSAYNRFIKVEIQRIKANNPDISHREAFSTAAKNWAHLPHIHLG 127 ****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MFTLVTVRCG HCTNLLSVNM GASLQVLPPQ EDHKQPQLTS PEDSSKDRGS SSSKCSKIGS 60 LESGERDQHR IPPIRPPEKR QRIPSAYNRF IKVEIQRIKA NNPDISHREA FSTAAKNWAH 120 LPHIHLGQKL DGNNKQSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	6e-53	YABBY family protein