PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958713.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 843aa    MW: 92124 Da    PI: 5.8083
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958713.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-182683457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022958713.1 26 YVRYTSEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                    5789****************************************************97 PP
2START1556.1e-491643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++ g a+ra+g+v  ++a   +e+l+d++ W +++++ e+      g  g+++l 
  XP_022958713.1 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPA-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELV 257
                     7899******************************************************.7777777777***********999999999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l+++ ++++lr+l+
  XP_022958713.1 258 YTQVYAPTTLAPaRDFWTLRYTITLENGSLVVCERSLSGSGAGPSpaaAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLY 352
                     **************************************99888888999********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + +++++ a+l++ ++
  XP_022958713.1 353 ESSKVVAQNMTIAALRYVRQ 372
                     ***************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    
MAMAIAHHRE SSSGSLTRHL DSTGKYVRYT SEQVEALERV YAECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLNAM NKLLMEENDR LQKQVSQLVC  120
ENGFMRQQLQ TVPAATTDAS CDSVVTTPQP SKTDANNPAG LLSIAEETLA EFLSKATGTA  180
VDWVQMPGMK PGPDSVGIFA ISQSCGGVAA RACGLVSLEP AKIAEILKDR PSWFRDCRSL  240
EVFTMFPAGN GGTIELVYTQ VYAPTTLAPA RDFWTLRYTI TLENGSLVVC ERSLSGSGAG  300
PSPAAAAQFV RAEMLPSGYL IRPCEGGGSI IHIVDHLNLE AWNVPEVLRP LYESSKVVAQ  360
NMTIAALRYV RQIAQETSGE VVYGLGRQPA VLRTFSQRLS RGFNDLVNGF NDNGWSLINC  420
EGAEDVVLAV NSTKNFGTTS NPANSLTYPG GVLCAKASML LQNVPPAVLV RFLREHRSEW  480
ADFNIDAYSA ATLKANSYAY PGMRPTRFTG SQIIMPLGHT IEHEELLEVI RLEGHPMVQE  540
DAFVSRDIHL LQICSGINEN AVGACSELIF APIDEMFPDD APLLPSGFRI IPLDSRTSDA  600
KGALTTQRTL DLTSSLEVGS GTSNVAGDAS SSQCPRSVLT IAFQFPFESS MQDNVMNMAQ  660
QYVRSVISSV QRVAMAISPS GGSPSLGPKL SPGSPEALTL AHWICKSYSL QLGTELISSD  720
SLESDSLLKN LWNHQDAILC CSLKSLPVFM FANQAGLDML ETTLVALQDI TLDKIFDEAG  780
RKALCSDFPK LMQQGFAYLP GGICASTMGR HVSYEQAIAW KVLEADETTV HCLAFSFINW  840
SFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein