PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958781.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 247aa    MW: 28294.3 Da    PI: 10.4413
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958781.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.53.6e-0693140254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  h ++Er RR+r ++++    +llPk      +K++K +i++ A + I++L
  XP_022958781.1  93 CHRHMMNERTRREREKQSYLGVHSLLPKK-----TKNDKNSIVQAAARTIQEL 140
                     66799***********************9.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDDTFPVEFW HNDLFWLDAP ISVPVPVSAP AQQQKSAFVP YLSRPNFRIE QKNKLAAPAA  60
SNSVNKRVIE YWRKQWHEKK EAAALGDLER EKCHRHMMNE RTRREREKQS YLGVHSLLPK  120
KTKNDKNSIV QAAARTIQEL RASEEMLKRR NSELEMAIAA KNRENAKGTK PIRLEWPNPS  180
AGIDSMLAVL NVLKTGRINP KAIHANFFNS LFSAQLAIDD THMGGAEVER VLQATVREAD  240
GRFRRQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-37bHLH family protein