PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958830.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 394aa MW: 43350 Da PI: 6.674

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958830.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.1e-51	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kk++ ++++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_022958830.1 11 VPPGFRFHPTEEELLHYYLRKKLSFHTVDL-DVIPDVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69*************************9.99**********964444222455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_022958830.1 105 YT-NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MSISVNGHSQ VPPGFRFHPT EEELLHYYLR KKLSFHTVDL DVIPDVDLNK LEPWDIQEKC 60 KIGTTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTNSRR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD EISTSQSSNI KASSSGVIGD GGQEEGWVVC RIFKKKNHHK 180 TLDSPVSTTI TETPSSLLLD SCNDGALEQI FHYMGRSCKD IEDGDGDGDG DGGGGRLLSP 240 IDTSTGGSYL DGRFSKLPNL ESPNSTSTHN CHQPINNHVG PTDPILISGY QLESSSAAAA 300 TAPHNWAAFD RLVASQLNGQ IEVSNMIYYN DQLPTPPTLR GTTSFSSKSS SSSYTAAAGQ 360 DYNNVDTELW SFAKLSSSLS SSSDPLCHVS NTPI

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MSISVNGHSQ VPPGFRFHPT EEELLHYYLR KKLSFHTVDL DVIPDVDLNK LEPWDIQEKC  60
KIGTTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTNSRR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD EISTSQSSNI KASSSGVIGD GGQEEGWVVC RIFKKKNHHK  180
TLDSPVSTTI TETPSSLLLD SCNDGALEQI FHYMGRSCKD IEDGDGDGDG DGGGGRLLSP  240
IDTSTGGSYL DGRFSKLPNL ESPNSTSTHN CHQPINNHVG PTDPILISGY QLESSSAAAA  300
TAPHNWAAFD RLVASQLNGQ IEVSNMIYYN DQLPTPPTLR GTTSFSSKSS SSSYTAAAGQ  360
DYNNVDTELW SFAKLSSSLS SSSDPLCHVS NTPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-114	NAC family protein