PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958849.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 207aa MW: 23113.2 Da PI: 9.0604

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958849.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.4	3.4e-10	38	84	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+r+h e+Er+RR+++N++f Lr+++P+ ++K + L Av YI+ L XP_022958849.1 38 RKRNHVEAERQRREKLNKRFYALRSVVPNV-------MDKTSLLWDAVWYINAL 84 7899*************************8.......79999999999999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MSEAPGRGKS RRAGSAGELE LSDSDSPVGK AAGKRRGRKR NHVEAERQRR EKLNKRFYAL 60 RSVVPNVMDK TSLLWDAVWY INALKGKVEE MELELEVRKL KKGGEEGVEK QSTTTSEEEE 120 EQGKGSTLFD VEVKRMGGGD AMVRVESHNQ NCPSATLMGA LRDLEVHIHH ANITNVNDLM 180 LQHVLIKLPH AFSTDEAFKA SLLSKLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	50	KRNHVEAERQRR
2	40	50	RNHVEAERQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-33	bHLH family protein