PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959060.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 674aa    MW: 74865.2 Da    PI: 6.0554
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959060.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.52.6e-27227280155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gL++e+v+SHLQkYRl
  XP_022959060.1 227 KPRVVWSVELHQQFVIAVDQL-GIDKAVPKKILELMNVPGLSRENVASHLQKYRL 280
                     79*******************.********************************8 PP
2Myb_DNA-binding35.81.8e-11229279148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av qlG +   +k+I + m+  g++++++ s++qky+
   XP_022959060.1 229 RVVWSVELHQQFVIAVDQLGIDkaVPKKILELMNvPGLSRENVASHLQKYR 279
                      678***********************************************7 PP
3Response_reg71.82.7e-24491571109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+p+ +++l+++l++  y  v+ +  +e al +l+e++  +D++l D+ mp+mdG++ll++   e  +lp+i+++a + ++ + + +  G
  XP_022959060.1  49 VLVVDDDPTCLRILEKMLQNCCY-AVTKCNRAEIALSMLRENKngFDIVLSDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDGKNVVMKGVIHG 141
                     89*********************.***************999999**********************6644.8********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +e+l +
  XP_022959060.1 142 ACDYLIKPVRIEALKN 157
                     ************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    
MALFCLWGYL SLWGMDPSHT KGTMPTSTSI SARKAADMGC DQFPAGLRVL VVDDDPTCLR  60
ILEKMLQNCC YAVTKCNRAE IALSMLRENK NGFDIVLSDV HMPDMDGFKL LEQVGLEMDL  120
PVIMMSADDG KNVVMKGVIH GACDYLIKPV RIEALKNIWQ HVVRKRKSEW KDLEQSGSMD  180
DGDRDQNVSE GANYSSSAYD GSWNSSKRKR DAEEELEERD DTSALKKPRV VWSVELHQQF  240
VIAVDQLGID KAVPKKILEL MNVPGLSREN VASHLQKYRL YLRRLSGVSP HPSNLNNSFM  300
NPQDHPPFGS MASSYNGIDL QTLLVTGQLS PQSLAALQAT GLRRPTAKSS LPMALVDQNN  360
IFSFENPKLR FGEDQTQHLN NTKPVSLFHG IPTKMEPKQL ANMQHPSVQT QRNMNMNMNM  420
NMNMALNIKS EHGGTQLMHL SQQQTVGQTL NNSNVTHLPG IPSTLRNLII SGSVTTGNGT  480
ADNSHGPRYN LVSPTSVMVN YPMSQTTEVF QEEMNSNLKV SSGVMSSYGV FSDLHMQKSH  540
DWDSQNVSTL AFGTPHHGNF IHHSFDISPS SLIHHGFPSS QTNGENHNSS VNGKTNFSFL  600
DSTQPGIPQS VDHNSFFDPG EVKNQIIPDA SYQTDLLSED FGQDELLGVF LKQEQQEDNG  660
SVDFSGYQTE NICV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-158ARR-B family protein