PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959307.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 412aa    MW: 45236.2 Da    PI: 8.6528
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959307.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-18226275356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+ta eAa a++ a+  l+ge
  XP_022959307.1 226 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAVEAAVAYDTAAYILRGE 275
                     8******9.**********955...5************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MADQFSLSEE QKIIIQKDFS SSSLQELVSG SCFYGDPSLW ESIARASRSE NGGSKGNDQS  60
KSPSSSSSSS SSPSSSCSTS FRMFSRGKTE ISGGNLIESN VQADGERFIP LNFLESFPKQ  120
ESESFSSSPL FQSRTDSTNL TLFLQEPTIV DPYPFQIQAQ NGFQWLKSNQ IQNQAEANAA  180
TASRNYSDFW LGVTKTQPMK QIGRKQGNHK TETSVTATAT AVGKLFRGVR QRHWGKWVAE  240
IRLPRNRTRV WLGTFDTAVE AAVAYDTAAY ILRGEFAHLN FPDQKHRLKS NSLNRTTAAL  300
LEAKLQAITQ GNSGRKKTTT ATTATKSAID PSSISEKRLL QGDSKVLNLN QNPVRFSPEN  360
MSGSGGNGGG SETGELKRNE DGILEIEQHV QLSRMPSLDM DMIWDALLVS DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.16e-42ERF family protein