PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959319.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 278aa    MW: 31728.2 Da    PI: 6.1833
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959319.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.6e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rgrWT+eEd++l+++++  G g+Wk+ ++  g+ R++k+c++rw +yl
   XP_022959319.1 14 RGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYL 61
                     8*******************************99************97 PP
2Myb_DNA-binding55.51.3e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++Ede ++++++ lG++ W++Ia +++ gRt++++k++w+++l
   XP_022959319.1  67 RGNITPQEDETILKLHTTLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGKTPCCAKE GLRRGRWTAE EDDKLKKYIE ANGEGSWKSL PKNAGLLRCG KSCRLRWINY  60
LRTDLKRGNI TPQEDETILK LHTTLGNRWS LIAGHLPGRT DNEIKNYWNS HLSKKLYSSP  120
KKNSGIPKRT TSRRRGQQPS SSIKPSILQK KNMKKAMPRE EGSQPNSIPE GPETSKPNQE  180
EEEEEEEQAT TTTSGLDCDD EEKKLETHNS TMKDPKLEEE NWDLGSCEFT ADAEKRGNGF  240
TIVESVEWCY SAWPSSMNSS FNNNEWLNWE WEDDGVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.15e-70MYB family protein