PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959356.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family M-type_MADS
Protein Properties Length: 216aa    MW: 24157 Da    PI: 9.1217
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959356.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.51.7e-232673249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    + e ks +qvtfskRr+g++KKA ELSvLC+aeva+i+fs+++k++ +
  XP_022959356.1 26 KLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73
                    67899***************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MEEPKLQRKS IPMKKTLGRQ KIEIKKLEKK SSKQVTFSKR RAGLFKKAGE LSVLCGAEVA  60
IIVFSPNDKV FCFGHPDVDV LLDRYLTGNL SPPKPAESYV PVAEFNRDFA DLVLEFEAEK  120
KRAEELIQAS EESRNSGGFW WEEAVEGMRL EELKEFRSSL MDLRAKVAEK VEKLTAVRIG  180
GPLLPALPPP PPTQPMTPPS FHLAGNHHVA TGLGFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-35M-type_MADS family protein