PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959378.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 587aa MW: 63760.8 Da PI: 7.9088

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959378.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.2	2.5e-16	289	326	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkks+Clk+YCeCfaag++C e C+C dC+Nk XP_022959378.1 289 CKRCNCKKSRCLKLYCECFAAGVYCIEACSCLDCFNKP 326 89**********************************96 PP
2	TCR	51.2	2.4e-16	373	411	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_022959378.1 373 RHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNG 411 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MDSTPETKPT KPPPPPPPPL SKFEDSPVFN FINSLSPIKP VKSHHTVQTF NSISFPSLPV 60 FTSLPQFSPL KSPKRPNFSN ASRSPSAVSK NKGAVILMDQ LLEIFVPGIP PGDDLTPRVQ 120 PPEMVNSGAG EAHGVINGDV LNRAENQPLS NLQGGNMPRR CLDFEMAGML LPAAAAAPGD 180 GSFRGSSSSS SSSSFRCTLP RIGLHLNALA SSLKHSDSEN LCSERRPGFS SSSAAIFTSN 240 SIQDQFLFAS STPESENPQD PASLIGEDFN QINPIKNGKS MEVTGNGACK RCNCKKSRCL 300 KLYCECFAAG VYCIEACSCL DCFNKPIHES VVLETRRQIE SRNPLAFAPK VILNSDSVSE 360 LGEDSNKTPA SARHKRGCNC KKSNCLKKYC ECYQGGVGCS INCRCEGCKN GFGRKDESAL 420 IGTETQQEEE GREHCQKNAE VQSDEGQQNP INTAPSTQLG PRRSFISLPF HLKRRLPSSY 480 LDDESSSRLS VRFKLDEQGI IQTEAPPKFE RTTTPCEDVM PETVSNECPS STGGVKNVSP 540 NSKRVGLPPP QGDFRPLPST RISRKLILQS IPSFPSFTNP NSNEWTQ

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MDSTPETKPT KPPPPPPPPL SKFEDSPVFN FINSLSPIKP VKSHHTVQTF NSISFPSLPV  60
FTSLPQFSPL KSPKRPNFSN ASRSPSAVSK NKGAVILMDQ LLEIFVPGIP PGDDLTPRVQ  120
PPEMVNSGAG EAHGVINGDV LNRAENQPLS NLQGGNMPRR CLDFEMAGML LPAAAAAPGD  180
GSFRGSSSSS SSSSFRCTLP RIGLHLNALA SSLKHSDSEN LCSERRPGFS SSSAAIFTSN  240
SIQDQFLFAS STPESENPQD PASLIGEDFN QINPIKNGKS MEVTGNGACK RCNCKKSRCL  300
KLYCECFAAG VYCIEACSCL DCFNKPIHES VVLETRRQIE SRNPLAFAPK VILNSDSVSE  360
LGEDSNKTPA SARHKRGCNC KKSNCLKKYC ECYQGGVGCS INCRCEGCKN GFGRKDESAL  420
IGTETQQEEE GREHCQKNAE VQSDEGQQNP INTAPSTQLG PRRSFISLPF HLKRRLPSSY  480
LDDESSSRLS VRFKLDEQGI IQTEAPPKFE RTTTPCEDVM PETVSNECPS STGGVKNVSP  540
NSKRVGLPPP QGDFRPLPST RISRKLILQS IPSFPSFTNP NSNEWTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-106	CPP family protein