PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959505.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 277aa    MW: 30401.1 Da    PI: 7.1616
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959505.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.61.7e-18200234135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022959505.1 200 CLHCGAEKTPQWRAGPYGPKTLCNACGVRYKSGRL 234
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MESSLAFMDD LLDFSSDIGG EDEEDDAVPP FSVKPKAATD SSEFNAGFHP EDSSSCRVLP  60
EDYAEEELEW LSNEDVFPAV ETFVDILSDH HHDHPQPPSL MSVSKQNSPV SVLETTSISS  120
HGGNKPSAHG SILMSCCDGL KVPGKARSKR RRSRHVSGHH LWFKQQPSSR NVKQIQPITT  180
ATATTAAAVT TAKTAIGRKC LHCGAEKTPQ WRAGPYGPKT LCNACGVRYK SGRLVPEYRP  240
ASSPTFSPEL HSNSHRKVME MRRQKQFGMV VNPMDKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-57GATA family protein