PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959635.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 257aa    MW: 29425.9 Da    PI: 5.6912
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959635.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.61.9e-15552148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l ++v+ +G g+W++ a   g++R++k+c++rw++yl
   XP_022959635.1  5 KGPWTAEEDSILFNYVNSHGEGRWNAAACSAGLKRSGKSCRLRWLNYL 52
                     79************************8888889*************97 PP
2Myb_DNA-binding51.42.6e-1658101146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l++d++ qlG++ W++Iar+++ gRt++++k++w++
   XP_022959635.1  58 RGNITLQEQLLILDLHFQLGNR-WSKIARYLP-GRTDNEIKNYWRT 101
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDVRKGPWTA EEDSILFNYV NSHGEGRWNA AACSAGLKRS GKSCRLRWLN YLGPSVKRGN  60
ITLQEQLLIL DLHFQLGNRW SKIARYLPGR TDNEIKNYWR TRVQKQARQL KCDVNSKEFR  120
DTMRYVWMPR LFERIQASND SISAIAIDSD VVQPPQSHLD PTHSSPSKSS WVNPHVASTT  180
SISNSISDQV QLQVSPVSDV VENFKLIGTS EKDEMVILTD QGYDGDTMNE LIGWEESLEN  240
GLWNEEDMWF LQQQFSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.12e-76MYB family protein