PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959668.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 237aa MW: 27586.1 Da PI: 5.1124

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959668.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed++l++ ++q G +W++ +++ g+ R++k+c++rw +yl XP_022959668.1 14 RGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	48.9	1.5e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T eE+e +++++++lG++ W+ Ia++++ gRt++++k+ w++ XP_022959668.1 67 RGDFTREEEETIINLHQLLGNR-WSMIAAKLP-GRTDNEIKNVWHT 110 899*****************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MGRAPCCEKV GLKRGPWSPQ EDQILIKFIQ QNGHSNWRAL PKRAGLLRCG KSCRLRWINY 60 LRPDLKRGDF TREEEETIIN LHQLLGNRWS MIAAKLPGRT DNEIKNVWHT SLKKRLNQSQ 120 TREDHTELNK NDIPFRDQPP CSLDIKSDGE ENVDRCTKNN DDGKDTKLEE LAFAKDFLEN 180 LFSEEEIFPN NCDMIKNDDQ SPKDVEISSD TVDIMDFWRG VFMKDGELPE LQEINII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	5e-74	MYB family protein