PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959670.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 210aa    MW: 24272.6 Da    PI: 6.7944
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959670.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-1882132356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_022959670.1  82 YRGVRRRP-WGKYAAEIRDSTR---QgVRVWLGTFDSAEAAALAYDQAAFCMRGA 132
                     9*******.**********322...24**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSLHNHLFGY QENFENFPGK QNSHLSFHFN YLEEMLFADM SLSSSSSDSS PCLSPEMHVK  60
EEIEDGDIIV QDAQTQKEER AYRGVRRRPW GKYAAEIRDS TRQGVRVWLG TFDSAEAAAL  120
AYDQAAFCMR GALATLNFPV EVVRESLYEM KYRWEVGCSP VLALKRRHTI RRKKMAEAEK  180
MEKKMKKKKN VVVFEDLGVE YLEELLSLTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171189RRKKMAEAEKMEKKMKKKK
2172190RRKKMAEAEKMEKKMKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-49ERF family protein