PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959827.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 729aa MW: 79379.6 Da PI: 5.7862

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959827.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	5.8e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022959827.1 24 RERWTEEEHSRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MDPNSSGEDL VFKTRKPYTI TKQRERWTEE EHSRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALVKG IPVGQALDID IPPPRPKRKP SNPYPRKSPI SKLGANDGKL 120 STLVSSSQSK QILDLEKEPM NEATSGEEQA TNEKDTHDDN CSEVFTLSGE ANSFSLKNQN 180 SVPVQVKFND SCAFREFVPS VKEPLHEKGM GKLSELVISS ASREKLVSAE KKEALSCALS 240 GDEMQAAHNY PRHVPVHVVD GSLGANVQGS LRDASLQESA FHPSMEIQGE RSILQNPSGS 300 VSFEHQHNAP GSIYPSYPPI HPTPFTLLHP NQEHYKSVLQ MSSAFLNLIV STLQQNPAAH 360 AIASLTATCW PYVNPETSAD APACDTEGFK TKQMNPTPSK EAIAAATVAA ATAWWAAHGL 420 PPLCSPLHSA FTSAAISAPV VQSSDACPNS ESKDKAESSL QNAALQNQQL DAEQSEVLTA 480 HQSDSKSPTH SSSDSGNGGA DANATVKTVH NEKTPAEVEF HDSNEEKRGK QVDRSSCGSN 540 TPSGSDREID ATEKNDEKEE DKELETNHPA TESSIRRSRS IGNTSESWKE VSDEGRLAFQ 600 ALFTRDVLPQ SFSPPYDVES ENKENENVEK VSQSVDKDNS GASVLDLNSN TCGTSTSAIG 660 VNNGEGEFLS IGLGNGTPKV CRTGFKPYKR CSVEAKEKRM TATSSNHSEE GGQKRLRLDQ 720 KASNCCMYF

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MDPNSSGEDL VFKTRKPYTI TKQRERWTEE EHSRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALVKG IPVGQALDID IPPPRPKRKP SNPYPRKSPI SKLGANDGKL  120
STLVSSSQSK QILDLEKEPM NEATSGEEQA TNEKDTHDDN CSEVFTLSGE ANSFSLKNQN  180
SVPVQVKFND SCAFREFVPS VKEPLHEKGM GKLSELVISS ASREKLVSAE KKEALSCALS  240
GDEMQAAHNY PRHVPVHVVD GSLGANVQGS LRDASLQESA FHPSMEIQGE RSILQNPSGS  300
VSFEHQHNAP GSIYPSYPPI HPTPFTLLHP NQEHYKSVLQ MSSAFLNLIV STLQQNPAAH  360
AIASLTATCW PYVNPETSAD APACDTEGFK TKQMNPTPSK EAIAAATVAA ATAWWAAHGL  420
PPLCSPLHSA FTSAAISAPV VQSSDACPNS ESKDKAESSL QNAALQNQQL DAEQSEVLTA  480
HQSDSKSPTH SSSDSGNGGA DANATVKTVH NEKTPAEVEF HDSNEEKRGK QVDRSSCGSN  540
TPSGSDREID ATEKNDEKEE DKELETNHPA TESSIRRSRS IGNTSESWKE VSDEGRLAFQ  600
ALFTRDVLPQ SFSPPYDVES ENKENENVEK VSQSVDKDNS GASVLDLNSN TCGTSTSAIG  660
VNNGEGEFLS IGLGNGTPKV CRTGFKPYKR CSVEAKEKRM TATSSNHSEE GGQKRLRLDQ  720
KASNCCMYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	1e-101	MYB_related family protein