PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959838.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 277aa MW: 31943.3 Da PI: 4.5216

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959838.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7.3e-20	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k XP_022959838.1 64 KKRRLTQEQVHLLEISFESENKLEPERKTELANKLGLQPRQVAVWFQNRRARWK 117 5678*************************************************9 PP
2	HD-ZIP_I/II	128.3	3.3e-41	63	155	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl++eqv+lLE sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+ +++ + + ke+e+L++e+++ XP_022959838.1 63 EKKRRLTQEQVHLLEISFESENKLEPERKTELANKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSFRSSYDFVVKENERLKAEVAS 155 69**************************************************************************************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MTDGLIFNRS PGHSNMLFFG SGDSVLRGPR FAMGMEETSK RRPFFSSPDD LFDDDYYDDQ 60 PPEKKRRLTQ EQVHLLEISF ESENKLEPER KTELANKLGL QPRQVAVWFQ NRRARWKTKQ 120 LERDYDLLKS SYDSFRSSYD FVVKENERLK AEVASLSEKL LAKEVVESSF QAKKSEPFLE 180 HQILVPVVQH SMKIEDHHSC RSNGSAVLDE DGPHLLDSGD SYLLSNDYNG CVLPVFGMNS 240 EEEDGSDDGQ GYFSAIYTTD DQQTNEVEPL TWWDWTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	120	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-68	HD-ZIP family protein