PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959966.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 365aa MW: 39681.5 Da PI: 4.9236

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959966.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.3	7.4e-27	45	139	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li++++ e+r+r ++ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ +++s+s +++ ++l+ XP_022959966.1 45 RWTRQEILVLIQGKKVAETRVRGARaatlafgsaQLEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQIRDDSESFWVMRNDLR 139 8*******************65444556666699******************************************999999999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MALQQLSLGP TPVDAVPDAV TNGLDARPIS SDGGDNGSKT PRLPRWTRQE ILVLIQGKKV 60 AETRVRGARA ATLAFGSAQL EPKWASVSSY CKRHGVNRGP VQCRKRWSNL AGDFKKIKEW 120 ESQIRDDSES FWVMRNDLRR ERKLPGFFDR EVYDILESGS APSPSPALAL ALAPAPAPPP 180 VPALTSALNS DDAEPEHVFD SFKTAAADDG LFSDFEQDET SQSPIKEVPG KEAPVPTPDG 240 EIPAPAPLSE KLYQPASQDC PDQGTSNERE AAAAAAAAAN PEIGSNLQEG RKRKRIAKEG 300 EEESMMVQDE LIGILEKNGK LLSAQLEAQN MNFQLDREQR RYHADGLVTV LNKVADALGR 360 IADKL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MALQQLSLGP TPVDAVPDAV TNGLDARPIS SDGGDNGSKT PRLPRWTRQE ILVLIQGKKV  60
AETRVRGARA ATLAFGSAQL EPKWASVSSY CKRHGVNRGP VQCRKRWSNL AGDFKKIKEW  120
ESQIRDDSES FWVMRNDLRR ERKLPGFFDR EVYDILESGS APSPSPALAL ALAPAPAPPP  180
VPALTSALNS DDAEPEHVFD SFKTAAADDG LFSDFEQDET SQSPIKEVPG KEAPVPTPDG  240
EIPAPAPLSE KLYQPASQDC PDQGTSNERE AAAAAAAAAN PEIGSNLQEG RKRKRIAKEG  300
EEESMMVQDE LIGILEKNGK LLSAQLEAQN MNFQLDREQR RYHADGLVTV LNKVADALGR  360
IADKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-110	Trihelix family protein