PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959999.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 320aa    MW: 34352 Da    PI: 9.7059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959999.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.3e-1871120255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  XP_022959999.1  71 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFSTAEDAARAYDRAAIILYG 120
                     59****999.**********954...5**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDDHSPSSSF PHPPRDHPSS SSSSPSPDPN SPLLPPPNPP PPSNTTPSSP TPTNGARKRK  60
GKGGPDNNKF RYRGVRQRSW GKWVAEIREP RKRTRKWLGT FSTAEDAARA YDRAAIILYG  120
SRAQLNLQAA SPNSSSSSHS SSSQSNSRSN NLQTLRPLLP RPAAAAFSFS SMASSLPIMT  180
SHQSSSSNSN SSNFLPYGVY PSPGFTLMCP NLVHQYPPQL TQHPHAFSAP SNEIPSTSTV  240
TTSIATPSPP STTSYHQNPN PLLVASPQIN PSPVAPPPLV SDLVVGPIGP GSPAVGWPLE  300
NDEDYLPSLW DYGDPFFFDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.12e-31ERF family protein