PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022960130.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1037aa MW: 115041 Da PI: 9.5632

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022960130.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.4	7.5e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g++ +qV+ +F +R + +k XP_022960130.1 69 KRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQRSRVRK 125 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1037 aa Download sequence
MEVVKDDFSN LEIGTSVESF QKFLDSQNDL FRSQVDQLQR VVVTQCKLTG ANPLSQEMAA 60 GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR 120 SRVRKLVRLS RERSIQSNSC KQLEVGGIAT NNDPSMPIDA VPLNSDALVP LNSDAPIPLN 180 SEAPVPLNFA TPVPLNTIEP SNVDNGPSCS TQDSKLSDID GIDKHFVQTI FSMMQKEETF 240 SGQVKLMEWI LQIQNSSVLC WFLTKDGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH 300 KALPMHISAI LQSVNNLRFY RTSDISNRAR FLISRWSKLL IRSQALKKPN GMKLLTNSQT 360 DMILKQSIGG ITSDESWKSN IDIPENFGNP SVNVDNMRKS ETHQALKLLP ASSDDSNRKN 420 VLGLSSSRFR ERRKVQMVEQ PEQKVAGRNL QAPRTPASQG RPMSTDDIQK AKMRAQFMQS 480 KYGKTGLSNG RTHTKSENVN KPLHSSASSP ASKISLRPKF EDQKKAMVLL PKNSNKVETP 540 LHSKIEVEFK DSLGEKCKRV QIQWRMPPEM KFNDLWRVGG GDNSKEAGFQ KNRNSREKET 600 FYKTILEIPP NPKEPWDLEM DYDDSLTPEI LTEQLPDNES SEPEIRNCVV DGAVPSEVIS 660 SQDLKPNAAA DEPDLELLAV LLKNPELVYA LTSSQAGNLP AQETVKLLDM IKAGVANGVN 720 GMETTLEKVE VSLPSPTPSS DAGTSGWKPA VFKNPFSQRD SIAESRVALP SPPVDTSSIA 780 VSRVPPVSQQ LPASVSQFSL PQTMINRLQH DHVVHSHQHQ HQQGVLNPNV RLPNSEVALA 840 SRSFPITKLP LVNQSTAAAS SVRIDGGNDT KPVSFASSTL ERVPISFQSP PSPTPTRMPP 900 IQQQRQQPQL QPYRSEHPHQ TRVNISSSSA EKSAPGLGSW RPRLQDIGSH YNSGGKHNNE 960 SKYVGGPMAG RGGGPSWGRN EFESWSPENS PVRTQEYSRP ARSYGAAEQQ RQSSSPYGYG 1020 EQNRHGNNSR RWHDRQY

Sequence ? help Back to Top

Protein Sequence Length: 1037 aa Download sequence

MEVVKDDFSN LEIGTSVESF QKFLDSQNDL FRSQVDQLQR VVVTQCKLTG ANPLSQEMAA  60
GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR  120
SRVRKLVRLS RERSIQSNSC KQLEVGGIAT NNDPSMPIDA VPLNSDALVP LNSDAPIPLN  180
SEAPVPLNFA TPVPLNTIEP SNVDNGPSCS TQDSKLSDID GIDKHFVQTI FSMMQKEETF  240
SGQVKLMEWI LQIQNSSVLC WFLTKDGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH  300
KALPMHISAI LQSVNNLRFY RTSDISNRAR FLISRWSKLL IRSQALKKPN GMKLLTNSQT  360
DMILKQSIGG ITSDESWKSN IDIPENFGNP SVNVDNMRKS ETHQALKLLP ASSDDSNRKN  420
VLGLSSSRFR ERRKVQMVEQ PEQKVAGRNL QAPRTPASQG RPMSTDDIQK AKMRAQFMQS  480
KYGKTGLSNG RTHTKSENVN KPLHSSASSP ASKISLRPKF EDQKKAMVLL PKNSNKVETP  540
LHSKIEVEFK DSLGEKCKRV QIQWRMPPEM KFNDLWRVGG GDNSKEAGFQ KNRNSREKET  600
FYKTILEIPP NPKEPWDLEM DYDDSLTPEI LTEQLPDNES SEPEIRNCVV DGAVPSEVIS  660
SQDLKPNAAA DEPDLELLAV LLKNPELVYA LTSSQAGNLP AQETVKLLDM IKAGVANGVN  720
GMETTLEKVE VSLPSPTPSS DAGTSGWKPA VFKNPFSQRD SIAESRVALP SPPVDTSSIA  780
VSRVPPVSQQ LPASVSQFSL PQTMINRLQH DHVVHSHQHQ HQQGVLNPNV RLPNSEVALA  840
SRSFPITKLP LVNQSTAAAS SVRIDGGNDT KPVSFASSTL ERVPISFQSP PSPTPTRMPP  900
IQQQRQQPQL QPYRSEHPHQ TRVNISSSSA EKSAPGLGSW RPRLQDIGSH YNSGGKHNNE  960
SKYVGGPMAG RGGGPSWGRN EFESWSPENS PVRTQEYSRP ARSYGAAEQQ RQSSSPYGYG  1020
EQNRHGNNSR RWHDRQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-148	HB-other family protein